The detailed information of tRNA gene sequence


Sequence ID>WENV180094336
Genome IDMTBK01002831
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 105291
End posion on genome 105216
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aagagatttt
tRNA gene sequence 
GTTTCGTTAGCTCAGCCGGTTCAGAGCGCTTGCTTCACACGCAAGAGGTCCGCGGTTCGA
ATCCGCGACGAAACACag
Downstream region at tRNA end position 
agtagctttt
Secondary structure (Cloverleaf model)
>WENV180094336	Val	CAC
                   t      ACag agtagctttt
                     G - C
                     T - A
                     T - A
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     G C G C C     A
    C C G A        A      | | | | |     G
  G         C T C G       C G C G G     C
  G         | | | |                 T T
  T         G A G C
    T C A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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