The detailed information of tRNA gene sequence


Sequence ID>WENV180094342
Genome IDMTBK01003020
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 548
End posion on genome 473
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ggatttttat
tRNA gene sequence 
TCCTCGTTAGCTCAGTCGGTAGAGCATGCGGCTGTTAACCGCAGAGTCGTTGGTTCGAGT
CCAACACGGGGAGCCA
Downstream region at tRNA end position 
atctatactc
Secondary structure (Cloverleaf model)
>WENV180094342	Asn	GTT
                   t      GCCA atctatactc
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     T - A          T G
                    T     C A A C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T T G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GAGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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