The detailed information of tRNA gene sequence


Sequence ID>WENV180094346
Genome IDMTBK01003243
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2361
End posion on genome 2437
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aatttgggaa
tRNA gene sequence 
GTGCTCGTAGCTTAACTGGATAGAGCATCGGACTCCGGATCCGAAGACTGCGGGTTCAAG
TCCCGCCGAGCACGCCA
Downstream region at tRNA end position 
gaacctgaaa
Secondary structure (Cloverleaf model)
>WENV180094346	Arg	CCG
                   a      GCCA gaacctgaaa
                     G - C
                     T - A
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C A A        A      | | | | |     A
    T       T T C G       G C G G G     C
    G       + | | |                 T T
    G       G A G C
      A T A        A     AGACT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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