The detailed information of tRNA gene sequence


Sequence ID>WENV180094352
Genome IDMTBK01003643
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 410
End posion on genome 485
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
taattgagat
tRNA gene sequence 
AGGGGTATGGTGTCAATGGTTAGCATGGAGGTCTCCAAAACCTTAGGTGCGGGTTCGAAT
CCTGCTACCCCTGCCA
Downstream region at tRNA end position 
attattgggt
Secondary structure (Cloverleaf model)
>WENV180094352	Trp	CCA
                   t      GCCA attattgggt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G T C C     A
      A A C        G      | | + | |     G
    T       T G T G       G C G G G     C
    G       + | | +                 T T
    G       G C A T
      T T A        G     AGGT
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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