The detailed information of tRNA gene sequence


Sequence ID>WENV180094355
Genome IDMTBK01003734
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 607
End posion on genome 682
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ctccccgcga
tRNA gene sequence 
GGGCGATTGGCGCAGTTGGTAGCGCGCTTCCTTCACACGGAAGAGGTCGTCAGTTCGAGT
CTGGCATCGCCCACCA
Downstream region at tRNA end position 
aaagaacacc
Secondary structure (Cloverleaf model)
>WENV180094355	Val	CAC
                   a      ACCA aaagaacacc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     C G G T C     A
      T G A        G      | + | | |     G
    T       C G C G       G T C A G     C
    G       | | | |                 T T
    G       G C G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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