The detailed information of tRNA gene sequence


Sequence ID>WENV180094357
Genome IDMTBK01003734
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 312
End posion on genome 239
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attcacacgt
tRNA gene sequence 
GGTGGCGTGGCCGAGCGGCTAGGCACCGGCCTGCAAAGCCGTTTACACGGGTTCGAATCC
CGTCGCCACCTCCA
Downstream region at tRNA end position 
ctcttctaac
Secondary structure (Cloverleaf model)
>WENV180094357	Cys	GCA
                   t      TCCA ctcttctaac
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G C C C     A
        G A        G      | | | | |     G
      C     G C C G       A C G G G     C
      G       | | |                 T T
      G     A G G C
        C T        A     TTAC
                    C   T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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