The detailed information of tRNA gene sequence


Sequence ID>WENV180094359
Genome IDMTBK01003779
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2480
End posion on genome 2552
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctgttcccat
tRNA gene sequence 
TGCGGGGTAGAGCAGAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCAGTCGTTCGAATC
GGCTCCCCGCTACtg
Downstream region at tRNA end position 
agaaggaacc
Secondary structure (Cloverleaf model)
>WENV180094359	fMet	CAT
                   t      ACtg agaaggaacc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C G G C     A
        G A        A      | | + | |     G
      A     C G A G       A G T C G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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