The detailed information of tRNA gene sequence


Sequence ID>WENV180094363
Genome IDMTBK01003880
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 751
End posion on genome 826
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
caccagactc
tRNA gene sequence 
GGAATTTTAGCTCAGCCGGGAGAGCACCTGCTTCACACGCAGGGGGTCGTCGGTTCAAGT
CCGGCAAATCCCACCA
Downstream region at tRNA end position 
ccgtataagc
Secondary structure (Cloverleaf model)
>WENV180094363	Val	CAC
                   c      ACCA ccgtataagc
                     G - C
                     G - C
                     A   C
                     A - T
                     T - A
                     T - A
                     T - A          T G
                    T     C G G C C     A
      C G A        A      | + | | |     A
    C       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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