The detailed information of tRNA gene sequence


Sequence ID>WENV180094373
Genome IDMTBK01004085
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 239
End posion on genome 315
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagtactcat
tRNA gene sequence 
GGCGGCGTAGCTCAGGTGGCTAGAGCATGCGGTTCATACCCGCAGTGTCAGCGGTTCAAA
TCCGTTCGCCGCTACCA
Downstream region at tRNA end position 
agatgtcaaa
Secondary structure (Cloverleaf model)
>WENV180094373	Met	CAT
                   t      ACCA agatgtcaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T T G C C     A
      G G A        A      | + | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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