The detailed information of tRNA gene sequence


Sequence ID>WENV180094378
Genome IDMTBK01004099
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 533
End posion on genome 444
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtagctcttT
tRNA gene sequence 
GGAGAGGTGCGAGAGCGGTTGAATCGGGCTCCCTGCTAAGGAGTTGTACTGGGAACGGTA
CCGGGGGTTCGAATCCCCCCCTCTCCGTCt
Downstream region at tRNA end position 
ttgatttttt
Secondary structure (Cloverleaf model)
>WENV180094378	Ser	GCT
                   T      GTCt ttgatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TGTACTGGGAACGGTACC
                    G + T
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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