The detailed information of tRNA gene sequence


Sequence ID>WENV180094380
Genome IDMTBK01004099
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 327
End posion on genome 241
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gagtctgttg
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGAAGGAGACGGATTCGAAATCCGTTGTACTGTTTACGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGttg
Downstream region at tRNA end position 
cagtccctct
Secondary structure (Cloverleaf model)
>WENV180094380	Ser	CGA
                   g      Gttg cagtccctct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TGTACTGTTTACGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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