The detailed information of tRNA gene sequence


Sequence ID>WENV180094381
Genome IDMTBK01004099
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 228
End posion on genome 137
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtccctcT
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTCGAAGGTACACCCTTGGAAAGGGTGTGGGCTCTAACAGGGC
TCCGAGGGTTCGAATCCCTCTCTCTCCGTCC
Downstream region at tRNA end position 
cctttggtct
Secondary structure (Cloverleaf model)
>WENV180094381	Ser	GGA
                   T      GTCC cctttggtct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | |                   T T
    T       A G G T
      C G A        A     TGGGCTCTAACAGGGCTCC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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