The detailed information of tRNA gene sequence


Sequence ID>WENV180094383
Genome IDMTBK01004170
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 646
End posion on genome 561
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
nnnnnnatat
tRNA gene sequence 
GCCGAAGTGGTGGAATTGGCATACACGTACGACTCAAAATCGTATGGGCTTCGCCCGTGT
GGGTTCGACTCCCACCTTCGGCACCA
Downstream region at tRNA end position 
ttgcttttta
Secondary structure (Cloverleaf model)
>WENV180094383	Leu	CAA
                   t      ACCA ttgcttttta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T C
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       G G T G       G T G G G     C
    G         | | |                 T T
    G       A C A C
      C A T        G     TGGGCTTCGCCCGT
                    T - A
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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