The detailed information of tRNA gene sequence


Sequence ID>WENV180094387
Genome IDMTBK01004353
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4551
End posion on genome 4623
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
agaggttcat
tRNA gene sequence 
TGCGGGGTAGAGCAGAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCAGTGGTTCGAATC
CGCTCCCCGCTACta
Downstream region at tRNA end position 
aacaaccaca
Secondary structure (Cloverleaf model)
>WENV180094387	fMet	CAT
                   t      ACta aacaaccaca
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C G C C     A
        G A        A      | | + | |     G
      A     C G A G       A G T G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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