The detailed information of tRNA gene sequence


Sequence ID>WENV180094388
Genome IDMTBK01004390
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 6736
End posion on genome 6825
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atttccgtgt
tRNA gene sequence 
GGAGGGGTCGCATAGCGGTCTAGTGCGGCGGTCTTGAAAACCGCTATTCCCGCGAGGGAA
TCGAGAGTTCGAATCTCTCCCCCTCCGCCA
Downstream region at tRNA end position 
gtaagaatca
Secondary structure (Cloverleaf model)
>WENV180094388	Ser	TGA
                   t      GCCA gtaagaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      C G A        C      | | | | |     G
    G       T A C G       G A G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATTCCCGCGAGGGAATC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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