The detailed information of tRNA gene sequence


Sequence ID>WENV180094393
Genome IDMTBK01004656
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 467
End posion on genome 541
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cggctccacc
tRNA gene sequence 
GGGCCCGTAGCTCAGTTGGTAGAGCACCTCCATGGCATGGAGGGGGTCGCCCGTTCAAGT
CGGGTCGGGTCCACCt
Downstream region at tRNA end position 
cacacgacat
Secondary structure (Cloverleaf model)
>WENV180094393	Ala	GGC
                   c      ACCt cacacgacat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G G G C     A
      T G A        A      + | | | |     A
    T       C T C G       G C C C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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