The detailed information of tRNA gene sequence


Sequence ID>WENV180094394
Genome IDMTBK01004669
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 269
End posion on genome 345
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tggatcgtcT
tRNA gene sequence 
GGGGGCATAGCTCAGTTGGCAGAGCACGAGCTTTGCAAGCTCGGGGTCACCGGTTCAAGC
CCGGTTGCCTCCATCC
Downstream region at tRNA end position 
ctggcctgcg
Secondary structure (Cloverleaf model)
>WENV180094394	Ala	TGC
                   T      ATCC ctggcctgcg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     A - T          C G
                    T     T G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    G - C
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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