The detailed information of tRNA gene sequence


Sequence ID>WENV180094402
Genome IDMTBK01005307
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 579
End posion on genome 663
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctattatttt
tRNA gene sequence 
GCCCGGATGGCGGAACTGGTAGACGCGCTGGTCTCAAACACCAGTGGTAGCAATACTGTG
CCGGTTCGATTCCGGCTCCGGGTACaa
Downstream region at tRNA end position 
aaagctctga
Secondary structure (Cloverleaf model)
>WENV180094402	Leu	CAA
                   t      ACaa aaagctctga
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     C G G C C     A
      C A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTAGCAATACTGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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