The detailed information of tRNA gene sequence


Sequence ID>WENV180094403
Genome IDMTBK01005391
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 568
End posion on genome 494
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaattatttt
tRNA gene sequence 
GGCGGGATAGCTCAGGTGGTTAGAGCGACGGATTCATAACCCGTAGGTCGCGAGTTCAAC
TCTCGCTCCCGCTACta
Downstream region at tRNA end position 
acaaaacaaa
Secondary structure (Cloverleaf model)
>WENV180094403	Met	CAT
                   t      ACta acaaaacaaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T C
                    T     C G C T C     A
      G G A        A      | | | | |     A
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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