The detailed information of tRNA gene sequence


Sequence ID>WENV180094406
Genome IDMTBK01005446
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 435
End posion on genome 509
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aggcgaatct
tRNA gene sequence 
GGCCCCATCGTCTAGTGGTTAGGACATCGGCCTCTCACGCCGGAAACCGGGGTTCAAGTC
CCCGTGGGGTCGCCA
Downstream region at tRNA end position 
acctcatccc
Secondary structure (Cloverleaf model)
>WENV180094406	Glu	CTC
                   t      GCCA acctcatccc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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