The detailed information of tRNA gene sequence


Sequence ID>WENV180094408
Genome IDMTBK01005508
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2957
End posion on genome 2882
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ttcttttttT
tRNA gene sequence 
GGGCCAGTAGCTCAGTCGGTTAGAGCACTTCTCTGATAAGGAAGGGGTCAATAGTTCAAC
TCTATTCTGGCCCATaa
Downstream region at tRNA end position 
aatagcgaaa
Secondary structure (Cloverleaf model)
>WENV180094408	Ile	GAT
                   T      ATaa aatagcgaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T C
                    T     T T A T C     A
      T G A        A      | | | | |     A
    C       C T C G       A A T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    T + G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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