The detailed information of tRNA gene sequence


Sequence ID>WENV180094410
Genome IDMTBK01005587
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 347
End posion on genome 256
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattcggtta
tRNA gene sequence 
GGAGAGGTGACCGAGCTGGCTGAAGGTGCACGCCTGCTAAGCGTGTGTAGGCTTATACCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tgaaatagtg
Secondary structure (Cloverleaf model)
>WENV180094410	Ser	GCT
                   a      GCCA tgaaatagtg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  C         A G G T
    T G A          G     TGTAGGCTTATACCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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