The detailed information of tRNA gene sequence


Sequence ID>WENV180094413
Genome IDMTBK01005594
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 859
End posion on genome 770
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagttggtcc
tRNA gene sequence 
GGTGAGGTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTACTCGCAAGGGTA
CCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
cacaaaaggc
Secondary structure (Cloverleaf model)
>WENV180094413	Ser	GCT
                   c      GCCA cacaaaaggc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACTCGCAAGGGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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