The detailed information of tRNA gene sequence


Sequence ID>WENV180094414
Genome IDMTBK01005750
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 303
End posion on genome 388
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position
aaatgaatat
tRNA gene sequence
GGGAGAGTTCCCGAGCGGCCAAAGGGGGCAGACTGTAAATCTGTTGCTATAGAGCTTCGG
TGGTTCGAATCCACCCTCTCCCACCA
Downstream region at tRNA end position
tagaacatta
Secondary structure (Cloverleaf model)
>WENV180094414	Tyr	GTA
                   t      ACCA tagaacatta
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C C A C C     A
      C G A        T      | | | | |     G
    G       G C C C       G G T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        G     TGCTATAGAGCTTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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