The detailed information of tRNA gene sequence


Sequence ID>WENV180094417
Genome IDMTBK01005835
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 131
End posion on genome 45
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtggtgctca
tRNA gene sequence 
GGAGGATTCGACTAGCGGCCTATGTCACACGCCTGGAACGCGTGCGGGTAGCAATACCCT
CGTGGGTTCAAATCCCACTTCCTCCGCag
Downstream region at tRNA end position 
atgactttca
Secondary structure (Cloverleaf model)
>WENV180094417	Ser	GGA
                   a      GCag atgactttca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T   T          T A
                    T     C A C C C     A
      C G A        C      | | | | |     A
    G       T C A G       G T G G G     C
    G         | | |                 T T
    C       T G T C
      C T A        A     CGGGTAGCAATACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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