The detailed information of tRNA gene sequence


Sequence ID>WENV180094428
Genome IDMTBK01006095
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 146
End posion on genome 72
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tcaattttcT
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTAGGCTCCATat
Downstream region at tRNA end position 
catttgaata
Secondary structure (Cloverleaf model)
>WENV180094428	Ala	TGC
                   T      ATat catttgaata
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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