The detailed information of tRNA gene sequence


Sequence ID>WENV180094431
Genome IDMTBK01006122
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 7723
End posion on genome 7647
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gttctttgat
tRNA gene sequence 
CGGGGCGTAGCTCAGCTTGGTAGAGCGCACGGTTCGGGACCGTGAGGCCGGAGGTTCAAA
TCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tccgaagttt
Secondary structure (Cloverleaf model)
>WENV180094431	Pro	CGG
                   t      ACCA tccgaagttt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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