The detailed information of tRNA gene sequence


Sequence ID>WENV180094438
Genome IDMTBK01006619
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1300
End posion on genome 1224
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctccgcgt
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCAGGGGAATCATAATCCCAAGGTCCGCGGTTCGAA
TCCGTGCGCCGCCACCA
Downstream region at tRNA end position 
ttctattctt
Secondary structure (Cloverleaf model)
>WENV180094438	Met	CAT
                   t      ACCA ttctattctt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     G T G C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    G   A
                    G - C
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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