The detailed information of tRNA gene sequence


Sequence ID>WENV180094444
Genome IDMTBK01006861
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2724
End posion on genome 2637
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atagtttaac
tRNA gene sequence 
GGAGAGGTGCAGGAGTGGTTGAACTGGCTCGCCTGGAAAGCGAGTGTACGTGAAAACGTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCaa
Downstream region at tRNA end position 
caattaaata
Secondary structure (Cloverleaf model)
>WENV180094444	Ser	GGA
                   c      GCaa caattaaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TGTACGTGAAAACGTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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