The detailed information of tRNA gene sequence


Sequence ID>WENV180094445
Genome IDMTBK01006874
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 155
End posion on genome 82
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gcaaataatg
tRNA gene sequence 
GGCTCCGTAGCCAAGTGGAAAGGCAAGGCACTGCAAATGCTTGATCACCGGTTCAAATCC
GGTCGGGGCCTCCA
Downstream region at tRNA end position 
aagtataaat
Secondary structure (Cloverleaf model)
>WENV180094445	Cys	GCA
                   g      TCCA aagtataaat
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     C - G
                     G - C          T A
                    T     T G G C C     A
        G A        A      | | | | |     A
      T     A C C G       A C C G G     C
      G       | | |                 T T
      G     A G G C
        A A        A     GATC
                    A - T
                    G + T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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