The detailed information of tRNA gene sequence


Sequence ID>WENV180094447
Genome IDMTBK01006974
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 529
End posion on genome 617
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggaatatag
tRNA gene sequence 
GGAAGAGTGCTGGAGTTTGGTTGAACAGGCAGACCTGGAAAGTCTGTGTACCTGAAAGGT
GCCGTGGGTTCAAATCCCACCTCTTCCGCtt
Downstream region at tRNA end position 
tgatttaaag
Secondary structure (Cloverleaf model)
>WENV180094447	Ser	GGA
                   g      GCtt tgatttaaag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     A
  T         G G T C       G T G G G     C
  G           | | |                 T T
  G         A C A G
    T T G A        G     TGTACCTGAAAGGTGCC
                    C - G
                    A - T
                    G - C
                    A - T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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