The detailed information of tRNA gene sequence


Sequence ID>WENV180094448
Genome IDMTBK01007025
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 279
End posion on genome 206
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttgtgcatcc
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGGGTTCGAAT
CCCCTCAGCTCCACtc
Downstream region at tRNA end position 
tatcaccccc
Secondary structure (Cloverleaf model)
>WENV180094448	Ala	GGC
                   c      ACtc tatcaccccc
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A   C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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