The detailed information of tRNA gene sequence


Sequence ID>WENV180094450
Genome IDMTBK01007100
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 369
End posion on genome 459
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaaataaac
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGTTGAACGGGACGGTCTCGAAAACCGTTGTGCCTATTAAAGGT
ACCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
gttgcatttt
Secondary structure (Cloverleaf model)
>WENV180094450	Ser	CGA
                   c      GCCA gttgcatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTGCCTATTAAAGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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