The detailed information of tRNA gene sequence


Sequence ID>WENV180094466
Genome IDMTBK01008441
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 142
End posion on genome 217
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cataaggcat
tRNA gene sequence 
CGGGGTGTGGCTCAGGTGGTAGAGCGCTTGGTTCGGGACCAAGAGGCCGCAAGTTCAAGT
CTTGTCACTCCGACCA
Downstream region at tRNA end position 
ttcgacctcc
Secondary structure (Cloverleaf model)
>WENV180094466	Pro	CGG
                   t      ACCA ttcgacctcc
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          T G
                    T     T G T T C     A
      G G A        G      + | | | |     A
    T       C T C G       G C A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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