The detailed information of tRNA gene sequence


Sequence ID>WENV180094475
Genome IDMTBK01009088
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1289
End posion on genome 1364
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
attaaaactt
tRNA gene sequence 
GCCTCCGTAGCTCAGAGGATAGAGCAGTTCCCTTCTAAGGAAAAGGTCGGGGGTTCGACT
CCCTCCGGAGGCGCCA
Downstream region at tRNA end position 
agaaagcccg
Secondary structure (Cloverleaf model)
>WENV180094475	Arg	TCT
                   t      GCCA agaaagcccg
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C          T C
                    T     C T C C C     A
      A G A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      T A          A     AGGTC
                    G   A
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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