The detailed information of tRNA gene sequence


Sequence ID>WENV180094478
Genome IDMTBK01009783
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1817
End posion on genome 1730
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tcgccgcgtt
tRNA gene sequence 
GCCCGGGTGGCGAAATGGCAGACGCAGAGGGCTTAAACCCCTTGGCCTCCAACGAGGCGT
GCGGGTTCGAGTCCCGCCCCGGGCACCA
Downstream region at tRNA end position 
ggaatcgcag
Secondary structure (Cloverleaf model)
>WENV180094478	Leu	TAA
                   t      ACCA ggaatcgcag
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     G
    G       A G C G       G C G G G     C
    G         | | |                 T T
    C       A C G C
      A G          A     GGCCTCCAACGAGGCGT
                    G + T
                    A - T
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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