The detailed information of tRNA gene sequence


Sequence ID>WENV180094481
Genome IDMTBK01010044
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1349
End posion on genome 1275
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tggtgtttga
tRNA gene sequence 
GGGGCCATGGCGCAATTGGTAGCGCACCTGCTTTGCAAGCAGGGGGTTAGGGGTTCGAGT
CCCCTTGGCTCCACCc
Downstream region at tRNA end position 
aaagtgtctt
Secondary structure (Cloverleaf model)
>WENV180094481	Ala	TGC
                   a      ACCc aaagtgtctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     T C C C C     A
      T A A        G      | | | | |     G
    T       C G C G       A G G G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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