The detailed information of tRNA gene sequence


Sequence ID>WENV180094488
Genome IDMTBK01010643
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9518
End posion on genome 9592
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
gaaagtccat
tRNA gene sequence 
GCGCCCGTGGTGAAAGGGATATCACGCAGGCCTCCGGAGCCTGAAGTCGGGGTTCGAATC
CCTGCGGGCGCACCA
Downstream region at tRNA end position 
ggcaaccccc
Secondary structure (Cloverleaf model)
>WENV180094488	Arg	CCG
                   t      ACCA ggcaaccccc
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G T C C C     A
      G A A        G      | + | | |     G
    G       A G T G       C G G G G     C
    G       | | | |                 T T
    A       T C A C
      T A          G     AAGT
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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