The detailed information of tRNA gene sequence


Sequence ID>WENV180094489
Genome IDMTBK01010800
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 672
End posion on genome 597
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cggtccatat
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGCAGAGCACCGGTCTCCAAAACCGGGGGCTGCGGGTTCGATT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
ttataaaaac
Secondary structure (Cloverleaf model)
>WENV180094489	Trp	CCA
                   t      GCCA ttataaaaac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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