The detailed information of tRNA gene sequence


Sequence ID>WENV180094491
Genome IDMTBK01010919
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 147
End posion on genome 220
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cagcagtaac
tRNA gene sequence 
GGTTCCTTGGCCAAGTGGTAAGGCAATAGACTGCAACTCTGTGATCATCGGTTCGAATCC
GATAGGAACCTCCA
Downstream region at tRNA end position 
aattggggat
Secondary structure (Cloverleaf model)
>WENV180094491	Cys	GCA
                   c      TCCA aattggggat
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     T A G C C     A
        G A        G      | | | | |     G
      T     A C C G       A T C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATC
                    A - T
                    T + G
                    A - T
                    G - C
                    A - T
                  C       C
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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