The detailed information of tRNA gene sequence


Sequence ID>WENV180094494
Genome IDMTBK01010919
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 442
End posion on genome 518
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ttttttatgt
tRNA gene sequence 
CGGGATGTAGCACAGCTTGGTAGTGCACTTGATTTGGGATCAAGGGGTCGCAGGTTCAAA
TCCTGTCATCCCGACCA
Downstream region at tRNA end position 
ttttttttat
Secondary structure (Cloverleaf model)
>WENV180094494	Pro	TGG
                   t      ACCA ttttttttat
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C A C G       G C A G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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