The detailed information of tRNA gene sequence


Sequence ID>WENV180094495
Genome IDMTBK01010919
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 532
End posion on genome 608
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttttattgc
tRNA gene sequence 
GGCGGGATAGCTTAGTTGGCTAGAGCGTTCGGTTCATACCCGAAAGGTCGTGGGTTCGAG
TCCCACTCCCGCTACCA
Downstream region at tRNA end position 
tttaaatatg
Secondary structure (Cloverleaf model)
>WENV180094495	Met	CAT
                   c      ACCA tttaaatatg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       T T C G       G T G G G     C
    G       + | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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