The detailed information of tRNA gene sequence


Sequence ID>WENV180094496
Genome IDMTBK01010919
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 856
End posion on genome 932
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ttagtcgctt
tRNA gene sequence 
GGACCCTTAGCTCAGTTGGTCAGAGCTGCCGGCTCATAACCGGTTAGTCGTAGGTTCGAG
TCCTACAGGGTCCACCA
Downstream region at tRNA end position 
agatggagga
Secondary structure (Cloverleaf model)
>WENV180094496	Ile2	CAT
                   t      ACCA agatggagga
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C A T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     TAGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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