The detailed information of tRNA gene sequence


Sequence ID>WENV180094498
Genome IDMTBK01011080
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 96
End posion on genome 19
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctatagaatt
tRNA gene sequence 
CGGGGCGTAGCGTAGTTTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
ttagcctacc
Secondary structure (Cloverleaf model)
>WENV180094498	Pro	TGG
                   t      ACCA ttagcctacc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    T T G A        A      + | | | |     A
  T         T G C G       G G A G G     C
  G         + | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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