The detailed information of tRNA gene sequence


Sequence ID>WENV180094501
Genome IDMTBK01011119
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 819
End posion on genome 729
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtgaagatc
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGTTGATTGGGGCCGCCTGCTAAGTGGTTGTTGGGTTTGTAGCT
CAACCGGGGGTTCGAATCCCCCCCTCCCCGCta
Downstream region at tRNA end position 
aaggatcagg
Secondary structure (Cloverleaf model)
>WENV180094501	Ser	GCT
                   c      GCta aaggatcagg
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G G G G G     C
    G       + | | |                 T T
    T       T T G G
      T G A        G     TGTTGGGTTTGTAGCTCAACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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