The detailed information of tRNA gene sequence


Sequence ID>WENV180094502
Genome IDMTBK01011356
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 590
End posion on genome 676
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcgattttgT
tRNA gene sequence 
GCCGAGGTAGTCTAGTCCGGGAAGGCGGTGGCCTCGAAAGCCACTGGTGCCTGGCACCTC
GGGAGTTCAAATCTCCCCCTCGGCGTtc
Downstream region at tRNA end position 
ttgctctaac
Secondary structure (Cloverleaf model)
>WENV180094502	Ser	CGA
                   T      GTtc ttgctctaac
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        A      | | | | |     A
    C       T C T G       G G G A G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGCCTGGCACCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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