The detailed information of tRNA gene sequence


Sequence ID>WENV180094505
Genome IDMTBK01011492
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 491
End posion on genome 565
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gaaaaaccta
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTCAAGACACCACCCTTTCACGGTGGTAACAGGGGTTCGATTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
ttttaaattt
Secondary structure (Cloverleaf model)
>WENV180094505	Glu	TTC
                   a      ACCA ttttaaattt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      C A          A     TAAC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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