The detailed information of tRNA gene sequence


Sequence ID>WENV180094507
Genome IDMTBK01011551
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 89667
End posion on genome 89592
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
tgaaaaaccg
tRNA gene sequence 
GGGGCGGTAGCTCAGTTGGTTAGAGCCGCGGACTCATAATCCGTTGGTCGCGGGTTCGAG
CCCCGCCCGCCCTACCg
Downstream region at tRNA end position 
agtgcgaaat
Secondary structure (Cloverleaf model)
>WENV180094507	Ile2	CAT
                   g      ACCg agtgcgaaat
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          C G
                    T     C G C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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