The detailed information of tRNA gene sequence


Sequence ID>WENV180094512
Genome IDMTBK01011854
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 473
End posion on genome 398
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcttaggtat
tRNA gene sequence 
AGGGCAGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTCGGTTGCGGGTTCGAGT
CCCTCCTGCCCTGCCA
Downstream region at tRNA end position 
aagcgtgaaa
Secondary structure (Cloverleaf model)
>WENV180094512	Trp	CCA
                   t      GCCA aagcgtgaaa
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      |   | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     CGGTT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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