The detailed information of tRNA gene sequence


Sequence ID>WENV180094513
Genome IDMTBK01011854
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 386
End posion on genome 298
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agcgtgaaat
tRNA gene sequence 
GGAGGGGTGGCAGAGTGGTCTATCGCGGCGGTCTTGAAAACCGCTAAGGCTAAACACCTT
CGAGGGTTCGAATCCCTCCCCCTCCGCCA
Downstream region at tRNA end position 
aggtgttgag
Secondary structure (Cloverleaf model)
>WENV180094513	Ser	TGA
                   t      GCCA aggtgttgag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       +   | |                 T T
    T       T C G C
      C T A        G     TAAGGCTAAACACCTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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